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Design a Synthetic RBS

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This tool will generate a synthetic 5' UTR/Ribosome Binding Site, thermodynamically calibrated to the open reading frame, and parameterized to incorpoate hybrid elements to initate translation in diverse prokaryotes + yeast. The base thermodynamic parameters for RBS strength are pulled from [Salis H, Methods in Enzymology 2011]. Constraints are imposed as follows:






  • Copyright Jaymin Patel, Yale University